CDS

Accession Number TCMCG075C15605
gbkey CDS
Protein Id XP_017976200.1
Location join(2312770..2312876,2313588..2313627,2313700..2313795,2313920..2314095,2314228..2314326,2314695..2314933,2314936..2314974,2314977..2315086)
Gene LOC18597851
GeneID 18597851
Organism Theobroma cacao

Protein

Length 303aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018120711.1
Definition PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing factor RS2Z32 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category A
Description Serine arginine-rich splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12896        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCGCTTCGATGGTCGTTATGGTACCACTCGTCTGTATGTTGGCCGTCTCTCCTCACGGACGCGAGCACGTGATCTGGAACACTTCTTCAGCCGATACGGGAGAATACGTGATGTGGATATGAAGCATGACTTCGCCTTTGTTGAACTTAGCTATCCCCGAGATGCTGATGGTGCAAGGTATAGCTTGGATGGTAGGGACTTTGATGGAAGTTGTATCATTGTTGAGTTTGCAAGGGGGGGTCCACGAGGTTCCCGAGAATATCTAGGAAGAGGCCCTCCACCTGGATCTGGTCGCTGCTTTAATTGTGGTATTGATGGCCATTGGGCCCGAGATTGTAGGGCTAACAAATGTTATCGTTGTGGAGAAAGAGGTCACATAGAGCGCAACTGCAAGAACAGGGCCAAAAAGCTAAACAGACCTGGGCGTAGTTATTCTCGATCACCAGTTAGATCACGCTCTCCTCATCATGGCAGAAGCGAGAGTCGAAGTTTCAGCCGTGGGCGGAGCTACAGTTGATCAAGATCTCCAGCAAGGAGAGAGCGAAGTATTGAGCGTGATGATAGAGTAGAGAGTCCTGAGCCCAAGAACATCGCACCTCTCTCCAAGGGGAGGAAACGCAGTCCCACACCTGATGAAGATAGCAGTCGGCAGGAGAGAGGTAGCCCTTTTCCACAAAATGGGAAACTGGCTGCTCAGCAAAATGAGGCCAATTACAGTGGTAGTCTCCGAGGAGTGAGCACGAACCCTGCTACTGATAGAGATGAGAGGCCTGCCAGAAGACGGTACAAAAATTTTGACACCAGTGGTCACAGCCAAAGTCCCAGTCCAAGGGACAACAGGAGTCCTGTTGATAATGATTATGATGACCCTCTCTCATCTAGAGGCAGCGAGTTCCCTTAA
Protein:  
MPRFDGRYGTTRLYVGRLSSRTRARDLEHFFSRYGRIRDVDMKHDFAFVELSYPRDADGARYSLDGRDFDGSCIIVEFARGGPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCRANKCYRCGERGHIERNCKNRAKKLNRPGRSYSRSPVRSRSPHHGRSESRSFSRGRSYSXSRSPARRERSIERDDRVESPEPKNIAPLSKGRKRSPTPDEDSSRQERGSPFPQNGKLAAQQNEANYSGSLRGVSTNPATXDRDERPARRRYKTXFDTSGHSQSPSPRDNRSPVDNDYDDPLSSRGSEFP